PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027121625.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 241aa    MW: 26770.3 Da    PI: 9.2096
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027121625.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.96.9e-2054103255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f tae Aa a+++a+++++g
  XP_027121625.1  54 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFETAEAAALAYDEAALRFKG 103
                     7********.**********94....45************************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MTAMVSALSQ VIGSTDNNNS VAVVGNYPAL ADPQPAPAIE NRAQQEQGNQ RRRHYRGVRQ  60
RPWGKWAAEI RDPKKAARVW LGTFETAEAA ALAYDEAALR FKGNKAKLNF PERVQGKTEY  120
GYLTTRQDAR VVADQQVSHS HSNRSFPPPH EYPHILQYAE LLRSGDQNNL HDEVISSSAS  180
SFPGGPLASQ SSSGSSSNMS SQEQGQQQFL QFQSPYNVGR TSSSGNSEMW EEFHNNTYAR  240
R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61890.11e-31ERF family protein