PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027122182.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family FAR1
Protein Properties Length: 318aa    MW: 36744.8 Da    PI: 6.9906
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027122182.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR129.13.3e-092663139
            FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskeg 39
                    kfYn+YA ++GFsvrk++ +k  ++g +t+r++ C ke 
  XP_027122182.1 26 KFYNKYAFKMGFSVRKDYLNKD-KDGVTTSRRYSCCKEE 63
                    6*****************9998.8899********9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MDCSKLAENG TPELGMEFNS EEDAYKFYNK YAFKMGFSVR KDYLNKDKDG VTTSRRYSCC  60
KEERTMKYRV HDLVLEHNHE LHIAQCAHMM PSQRKVSVAQ GFQAEISEDA GLSLKQSHEL  120
MGKEAGGMGN VGYTREDLKR YLRTRRERSL KYGEAGMLID YNFFGDVVTF DTTYKTNKEY  180
RPLGVFVGFN QHRQIVIFGA ALMYDETIDS FKWVFGTFLE AMCGKHPSTI LTDQDHAMAA  240
ALSLSCLKHF TVYFFRHFNS VVDEKRHNEL IAEYEMRQKL PMVGLRQTPM LVHASETYSP  300
TVFVAFQNEY GESTTMVY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-37FAR1 family protein