PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027122229.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 166aa MW: 19720.8 Da PI: 6.3923

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027122229.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	71.3	2.5e-22	12	126	1	109
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleev..ikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratk..sgyWkatgkd 89 +p+G+rF Ptdeelv++yL++kv k+l+++ + i+ d+y+ +P+ L + +++ +e+ew fF+ +d+ ++r++r++ g+W+ g++ XP_027122229.1 12 MPVGYRFVPTDEELVKYYLANKVLYKPLPVKIIreIDAHDLYSKHPKCLVgNgTFNDNEREWLFFIYKDEYFLGKTRSTRMVGngIGFWRFIGEE 106 699**********************8874433477778*****74347778899******99999*87633678*** PP NAM 90 kevlskkgelvglkktLvfy 109 +++++++g k L+++ XP_027122229.1 107 EPIHNSEGDIFAFKIYLTYF 126 ***999999999999987 PP

Sequence ? help Back to Top
Protein Sequence Length: 166 aa Download sequence
METSQHLLEL EMPVGYRFVP TDEELVKYYL ANKVLYKPLP VKIIREIDAH DLYSKHPKCL 60 VGNGTFNDNE REWLFFIYKD EYFLGKTRST RMVGNGIGFW RFIGEEEPIH NSEGDIFAFK 120 IYLTYFFSFL FNLCPTHFPA DSKLGVFRLI HCHLTYILRM EFETLP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62380.1	2e-20	NAC family protein