PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027122236.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 433aa MW: 50000.9 Da PI: 5.271

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027122236.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	146.2	1.8e-45	88	213	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 ppG+rF P+d el+v+yL+kk+++++l+ + i++v++y++ P ++ + +ekewyfF++r++ky++g+r+nra+ +gyWkatg dk+v + XP_027122236.1 88 PPGYRFCPKDGELIVFYLRKKIAKDELPR-NQIRHVNLYQHSPDKISeRYPPIGEKEWYFFTPRNRKYRNGERPNRAAGTGYWKATGADKPVNH- 180 9************************99.77**********8445556999**********************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 +g+lvg +k Lvfy+g+ pkg+kt+W+mheyr+ XP_027122236.1 181 DGSLVGFRKALVFYEGKPPKGVKTNWIMHEYRV 213 999**************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 433 aa Download sequence
MEMDQQNQPI REVFGTSPNT IQSLPPPFNE LQQEKPSLLP TSSTELQQEE PLLMAASSSN 60 ASSNNDGVNE FFDEEEEFID HAFFESFPPG YRFCPKDGEL IVFYLRKKIA KDELPRNQIR 120 HVNLYQHSPD KISERYPPIG EKEWYFFTPR NRKYRNGERP NRAAGTGYWK ATGADKPVNH 180 DGSLVGFRKA LVFYEGKPPK GVKTNWIMHE YRVKEPPRKR SNTMDMRLDD FVLCRIYKKT 240 DKSFKSRPRN EDSEDLDQND YPTPQGNERL DQNNAYPLDM DMGNKNDLGG LDRELNAFEA 300 SSGLVQSEYH IGLHEIFNVM GTSLLADSVK CFNNNFQIPF NCGAKPVNYK GFVYPMENAL 360 MPKYLREAPD VKPRKAMWNI TKDYETFNLS PEIDFGTTID FPDLDNLMNN RPSNSCFENS 420 NNPFDSPPMP RRS

Sequence ? help Back to Top

Protein Sequence Length: 433 aa Download sequence

MEMDQQNQPI REVFGTSPNT IQSLPPPFNE LQQEKPSLLP TSSTELQQEE PLLMAASSSN  60
ASSNNDGVNE FFDEEEEFID HAFFESFPPG YRFCPKDGEL IVFYLRKKIA KDELPRNQIR  120
HVNLYQHSPD KISERYPPIG EKEWYFFTPR NRKYRNGERP NRAAGTGYWK ATGADKPVNH  180
DGSLVGFRKA LVFYEGKPPK GVKTNWIMHE YRVKEPPRKR SNTMDMRLDD FVLCRIYKKT  240
DKSFKSRPRN EDSEDLDQND YPTPQGNERL DQNNAYPLDM DMGNKNDLGG LDRELNAFEA  300
SSGLVQSEYH IGLHEIFNVM GTSLLADSVK CFNNNFQIPF NCGAKPVNYK GFVYPMENAL  360
MPKYLREAPD VKPRKAMWNI TKDYETFNLS PEIDFGTTID FPDLDNLMNN RPSNSCFENS  420
NNPFDSPPMP RRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G27410.2	2e-55	NAC family protein