PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027122266.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family C2H2
Protein Properties Length: 232aa    MW: 26127 Da    PI: 9.7655
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027122266.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.84e-05106125322
                     ETTTTEEESSHHHHHHHHHH CS
         zf-C2H2   3 CpdCgksFsrksnLkrHirt 22 
                     C++C+ s+s++sn+k+Hir 
  XP_027122266.1 106 CKICKVSCSSPSNYKQHIRG 125
                     ******************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MAEERKENIM SVELAIQREL AYREKIASFL SGKEKEELLP LKVPCSTTFT SPYPSPMQNV  60
GQSSISTSAS RNQSSYRGKS PTLSPGPGHG KADQQCNISN RSDIFCKICK VSCSSPSNYK  120
QHIRGEKHRA MMHSPKLNKN AAVGPSKNQQ PRCNLCQIVC MDKTSLQLQL NGQKHKAKLR  180
MNELGRKGEI SQQFWCEMCQ VPCNNEETFQ LHLKGKNHVA RKYALEEEKK AI