PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027122291.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family FAR1
Protein Properties Length: 159aa    MW: 19041.8 Da    PI: 9.1072
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027122291.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR128.64.7e-092684161
            FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtg 61
                    kfYn+YA ++ Fsv+k++ +k  ++g +t r++ C k+g +++ + + +  + tra t+tg
  XP_027122291.1 26 KFYNKYAFKMDFSVCKDYLNKY-KDGLTTFRKYSCCKKGVKRKYEGD-VMPKMTRAPTKTG 84
                    6*****************9998.7888*************9999888.7777777777776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
MDCSKLAEDR TPELGMEFNS EENAYKFYNK YAFKMDFSVC KDYLNKYKDG LTTFRKYSCC  60
KKGVKRKYEG DVMPKMTRAP TKTGYEIEEV EQFNRAWEAM VKKHNLENNE WLSGLYRIRN  120
KWARCMIKER WTARMRSTQF SESLNAAIKD HLKLDDDLM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.14e-08FAR1 family protein