PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027122407.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 210aa    MW: 23324 Da    PI: 10.0748
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027122407.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.34.5e-19553153
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53
                    ++++GVr+++ +g+Wv+eIr+p        +r++lg+f taeeAa+a+++a+  +
  XP_027122407.1  5 KKFRGVRQRH-WGSWVSEIRHP-----LlkRRVWLGTFETAEEAARAYDEAAVLM 53
                    59*******9.**********8.....334*********************9765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MVQTKKFRGV RQRHWGSWVS EIRHPLLKRR VWLGTFETAE EAARAYDEAA VLMSGRNAKT  60
NFPVQMNQTA NTDHGSSSNL SSSSSSAALS AVLGAKLRKC CKSPSPSLTC LRLDTENSHI  120
GVWQKRAGAR PDSNWVMTVD LRRKASDRSD TSTNNVNDHQ QCPSFKRAIP PETTTTTNTT  180
TTTSSSSQGD SLDEEQRIAL QMIEELLNRN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.16e-69ERF family protein