PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027122408.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 121aa MW: 14353 Da PI: 5.0192

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027122408.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	25.4	4.7e-08	26	72	1	47
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk 47 kfYn+YA ++GFs rk++ +k k+ ++++r +C+++ kr+ e + XP_027122408.1 26 KFYNKYAFKMGFSRRKDYLNKDKDGVTTYRRYSYCKESVKRKYEGDV 72 6********************97777777777789999999887655 PP

Sequence ? help Back to Top
Protein Sequence Length: 121 aa Download sequence
MNCSKLTEDR IPELGTEFIS EEDAYKFYNK YAFKMGFSRR KDYLNKDKDG VTTYRRYSYC 60 KESVKRKYEG DVSELESTSV SFDEYMFMGY RLSTDSVSER NNIYGLRLTI DINSTQLHVD 120 E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07500.1	1e-06	FAR1 family protein