PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027122579.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 404aa    MW: 45202.8 Da    PI: 4.5898
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027122579.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.48.8e-19131180255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+G+r+++ +g+W+AeIrdp++     r++lg+f taeeAa+a++  +++++g
  XP_027122579.1 131 QYRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDTEARRIRG 180
                     69*******.**********954...4************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 404 aa     Download sequence    
MCGGAIISDF IPPSRSSRRL TADLLWGTGA DFPGTKKDIN KKKKNNKKNT SDLYSKPLRS  60
EVVDLDDEFE TDFQEFNDHS DDEAEELEDV KPFGFSASKH SAIPPRGTKY GKSSDSSDES  120
EKYSKRKRKN QYRGIRQRPW GKWAAEIRDP RKGVRVWLGT FNTAEEAARA YDTEARRIRG  180
KKAKVNFPDE TQGSASRRPV AVNPQKLQVK ENPGPVQPTL SESMTFTSSM ENDYYNSLNL  240
VEEKPPTKQF GYADVYPTIG DMEFKSFPQS DCASLYFNSD QGSNSFDCSD FGWGEQCPKT  300
PEISSILSSA IEVEESQFSE DTNPSKKLKS SLDPVPAADN DNKLSEELSA FESQMKFDQM  360
PLFDGNWEAS VDTFLNGDAT QGGGNAMEDL WTFDDISAMM GGVY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53910.33e-65ERF family protein