PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027123677.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

Dof

Protein Properties

Length: 501aa MW: 54120.4 Da PI: 6.698

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027123677.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.6	1.6e-39	147	207	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrknk+s XP_027123677.1 147 PDKILPCPRCNSMDTKFCYYNNYNINQPRHFCKSCQRYWTAGGTMRNVPVGAGRRKNKNSA 207 7899******************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 501 aa Download sequence
MKEIMEMKDP EIKLFGKKIA LLENGKRILV VVPAAGEDSS SVSGGENSVG SDSDLSMDSR 60 KAEDEKDQEK RETASDKDCP SGKLCSSEPR VKDPIAEELP ILKSSSDSDG NSNNYSTDED 120 SPVKQPPKAE NDQSDATDSQ QKTLKKPDKI LPCPRCNSMD TKFCYYNNYN INQPRHFCKS 180 CQRYWTAGGT MRNVPVGAGR RKNKNSASHC RHITISEALQ AARIDTPNGF HHLNFKPNGT 240 VLSFGSDSPL CDSMASVLNL AEKKSPNGSQ NGFYQLDHGI SVSLKGTENG DDCSSGSSVT 300 TSNSTVDGAK NGLQEPVMQQ INGFPSPVSC LPGVPWAFPW SSTVPLPAIC PPGFPMPFYP 360 TPFWNCGVPG AWSIPWLPPV FPTGNQKNSG SGPNSPTLGK HSRNGELIKQ NNPEGKDSQE 420 QRASEGSILI PKTLRIDDPD EAAKSSIWTT LGINYDSISR GGLFKALQPK GDEKKHLTTA 480 SPVLQANPAA LSRSVTFQES A

Sequence ? help Back to Top

Protein Sequence Length: 501 aa Download sequence

MKEIMEMKDP EIKLFGKKIA LLENGKRILV VVPAAGEDSS SVSGGENSVG SDSDLSMDSR  60
KAEDEKDQEK RETASDKDCP SGKLCSSEPR VKDPIAEELP ILKSSSDSDG NSNNYSTDED  120
SPVKQPPKAE NDQSDATDSQ QKTLKKPDKI LPCPRCNSMD TKFCYYNNYN INQPRHFCKS  180
CQRYWTAGGT MRNVPVGAGR RKNKNSASHC RHITISEALQ AARIDTPNGF HHLNFKPNGT  240
VLSFGSDSPL CDSMASVLNL AEKKSPNGSQ NGFYQLDHGI SVSLKGTENG DDCSSGSSVT  300
TSNSTVDGAK NGLQEPVMQQ INGFPSPVSC LPGVPWAFPW SSTVPLPAIC PPGFPMPFYP  360
TPFWNCGVPG AWSIPWLPPV FPTGNQKNSG SGPNSPTLGK HSRNGELIKQ NNPEGKDSQE  420
QRASEGSILI PKTLRIDDPD EAAKSSIWTT LGINYDSISR GGLFKALQPK GDEKKHLTTA  480
SPVLQANPAA LSRSVTFQES A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47500.1	3e-90	Dof family protein