PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027124068.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 184aa MW: 21591.4 Da PI: 10.3625

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027124068.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	59.7	9.6e-19	6	146	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiy..kvePwdLpk.............kvkaeekewyfFskrdkkyatgkrknratk 79 +ppGfrF+P+d el+ +yLk k++g + + ++vi e ++y ++ Pw L + +v + +e ++ ++ + ++++ r++ XP_027124068.1 6 MPPGFRFSPSDTELL-YYLKMKAKGMSfRPWNDVILEKNLYaeNAAPWMLFNnddpwqvtskvdaAVGKIYEEKVLYVVTKLVKIGSNKTMRSVG 99 79***********.********5455677888887722457999953467777766555422222224445555556666678999999 PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++W + + +v +++g+++g kk+L + r+ + ++W+mh y++ XP_027124068.1 100 PSTWDSATGKYKVWNSQGQVMGFKKILNLR--RKGMEVMSNWMMHAYHI 146 **955555677777*********8..5666689******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 184 aa Download sequence
MKKFRMPPGF RFSPSDTELL YYLKMKAKGM SFRPWNDVIL EKNLYAENAA PWMLFNNDDP 60 WQVTSKVDAA VGKIYEEKVL YVVTKLVKIG SNKTMRSVGP STWDSATGKY KVWNSQGQVM 120 GFKKILNLRR KGMEVMSNWM MHAYHISGVL LQEVKDNDYV ICRIKWDYSR NIWVLIKKFK 180 KVVD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G71930.1	6e-12	NAC family protein