PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027124183.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family FAR1
Protein Properties Length: 120aa    MW: 14058.3 Da    PI: 8.6616
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027124183.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR168.22e-2126113189
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 
                     kfYn+YA ++ Fsvrk++ +k  ++g +t+r++ C ke  +++ +++ +  +rtra  +tgC ak+++ + + + k++v++l+leHnHel
  XP_027124183.1  26 KFYNKYAFKMCFSVRKDYLNKD-KDGMTTSRRYSCCKECVKRKYESD-VMPKRTRAPMKTGCGAKMVIVLFRgTMKYRVHDLVLEHNHEL 113
                     6******************998.8888*************9999999.9999******************999****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 120 aa     Download sequence    
MDCSKLAEDG TPELGMEFNS EEDAYKFYNK YAFKMCFSVR KDYLNKDKDG MTTSRRYSCC  60
KECVKRKYES DVMPKRTRAP MKTGCGAKMV IVLFRGTMKY RVHDLVLEHN HELHITQCAQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.25e-14FAR1 family protein