PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027124293.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NAC
Protein Properties Length: 129aa    MW: 15302.5 Da    PI: 8.4119
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027124293.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM60.36.2e-191296181
             NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleev..ikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksg 81
                    +p+G+rF Ptdeelv++yL++kv  k+l+++ +  i+  d+y+ +P+ L  + +++ +e+ew+fF+ +d+    ++r++r++ +g
  XP_027124293.1 12 MPVGYRFVPTDEELVKYYLANKVLYKPLPVKIIreIDAHDLYSKHPKCLVgNgTFNDNEREWFFFIYKDEYFLGKTRSTRMVGNG 96
                    699************************8874433477778*********74347778899**********999999999988777 PP
Sequence ? help Back to Top
Protein Sequence    Length: 129 aa     Download sequence    
METSQRLLEL EMPVGYRFVP TDEELVKYYL ANKVLYKPLP VKIIREIDAH DLYSKHPKCL  60
VGNGTFNDNE REWFFFIYKD EYFLGKTRST RMVGNGIGSP PHAKKTHWRM EEYRLQTEIN  120
GRNKQEDGV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62380.15e-23NAC family protein