PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027125113.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 370aa MW: 41252.7 Da PI: 8.7979

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027125113.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	172.8	1e-53	18	144	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL kkv ++++++ +i evd++kvePwdLp k+k +ekewyfF rdkky+tg r+nrat++gyWkatgkdke+++ XP_027125113.1 18 LPPGFRFHPTDEELITHYLSKKVVDNSFSA-IAIGEVDMNKVEPWDLPWKAKMGEKEWYFFGVRDKKYPTGLRTNRATAKGYWKATGKDKEIFR- 110 79***********************999.88***********888999************************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 +++lvg+kktLvfykgrapkgekt+Wv he+rle XP_027125113.1 111 GKSLVGMKKTLVFYKGRAPKGEKTNWVTHEFRLE 144 999**************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence
MMENYSALIN GDDHQLDLPP GFRFHPTDEE LITHYLSKKV VDNSFSAIAI GEVDMNKVEP 60 WDLPWKAKMG EKEWYFFGVR DKKYPTGLRT NRATAKGYWK ATGKDKEIFR GKSLVGMKKT 120 LVFYKGRAPK GEKTNWVTHE FRLEGKFSLQ NLPKTAKNEW VICRVFQKTA GGKKIHISGL 180 LRSNSIETEF APSLLPPLMD SPTYNGASSK PTSLPESGHV HCFSSPFSSA QNKSLQEDML 240 LSYFSNPAFA PSTSNPLDVF SRGPFSNAFS WTQLGPVQGN YQFPGSIPMQ DTSALRTLIG 300 SCGQNMLKQS FKTEQQERVS ASQETGISTD MNTEISSVVS NLEMGRKSAV DQEPPSTSVG 360 PQGLVDCLWY

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence

MMENYSALIN GDDHQLDLPP GFRFHPTDEE LITHYLSKKV VDNSFSAIAI GEVDMNKVEP  60
WDLPWKAKMG EKEWYFFGVR DKKYPTGLRT NRATAKGYWK ATGKDKEIFR GKSLVGMKKT  120
LVFYKGRAPK GEKTNWVTHE FRLEGKFSLQ NLPKTAKNEW VICRVFQKTA GGKKIHISGL  180
LRSNSIETEF APSLLPPLMD SPTYNGASSK PTSLPESGHV HCFSSPFSSA QNKSLQEDML  240
LSYFSNPAFA PSTSNPLDVF SRGPFSNAFS WTQLGPVQGN YQFPGSIPMQ DTSALRTLIG  300
SCGQNMLKQS FKTEQQERVS ASQETGISTD MNTEISSVVS NLEMGRKSAV DQEPPSTSVG  360
PQGLVDCLWY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	1e-137	NAC family protein