PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027126883.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ZF-HD
Protein Properties Length: 90aa    MW: 9602.72 Da    PI: 8.6203
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027126883.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer106.81.3e-332480360
     ZF-HD_dimer  3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60
                    +vrY eC+kNhAaslGg+avDGC+Efm+s geegt+ al+CaACgCHRnFHR+eve++
  XP_027126883.1 24 TVRYAECQKNHAASLGGYAVDGCREFMAS-GEEGTSGALTCAACGCHRNFHRKEVESS 80
                    79**************************9.999*********************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 90 aa     Download sequence    
MKKRQIVVRK EGSRRCSSGS AVRTVRYAEC QKNHAASLGG YAVDGCREFM ASGEEGTSGA  60
LTCAACGCHR NFHRKEVESS VAEAVSESSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28917.12e-31ZF-HD family protein