PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027127004.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

STAT

Protein Properties

Length: 721aa MW: 81001.4 Da PI: 6.2165

Description

STAT family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027127004.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	STAT	183.2	3.4e-57	232	351	1	121
STAT 1 ldvvllnalgqpvekdvevvasLlyadsglvveksddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcdnrLfrikfeipklkky 95 ldv+ll+a+ qp+ k++evvasLlyad+ ++v +++d eapLL+sydG+e++s+drp+kl+ Grasfklk+sqLsskcdnrLfri+feipk+ +y XP_027127004.1 232 LDVTLLDAFDQPLIKEMEVVASLLYADNNEPVPETNDGEAPLLTSYDGIEYASSDRPSKLISGRASFKLKMSQLSSKCDNRLFRIRFEIPKI-RY 325 89****************************************************************************************9.6 PP STAT 96 pfleavskpirCisrsrntrsssltk 121 pflea+s pirCisrsrn+r+ss t XP_027127004.1 326 PFLEAFSPPIRCISRSRNARASSITL 351 ********************999875 PP

Sequence ? help Back to Top
Protein Sequence Length: 721 aa Download sequence
MVKILDGANV LEEMNYGLLK DLRVELKDSD TEENGAFCFS FWLYLANYGS PLPCGILHQE 60 HIDINSSVPF LLLNEKKKMM LLPVIFLHKE ASMLVGLNPL TEVPSVVTQF DIPLKKWVHV 120 GCEASQNSLR LRVNGEIVGE KHLSPVLNDE LHADGMKRRA LPCIIGEYQG FQGYVHFAKL 180 SPSGLPLKTH CIEDPPLQLS IDSSSASDIE EDSDGIWSIV GGKASCRRNF SLDVTLLDAF 240 DQPLIKEMEV VASLLYADNN EPVPETNDGE APLLTSYDGI EYASSDRPSK LISGRASFKL 300 KMSQLSSKCD NRLFRIRFEI PKIRYPFLEA FSPPIRCISR SRNARASSIT LKKLPSGVHL 360 LNGSQSPGLD DRSSELLNSV VREAKPSPSS KRVKLGQEKP FEIFADSFTS KRADKECKSY 420 AFTTTEGNHT YGSNLVRKPE NHDGSDNFSS DSETSETTKS DLMSIPSSTN QLSDMVVFKY 480 CLGGLSERAV LLKEIALSAR EEELVKFADQ VSLFSGCSHH RHQIMIAKRL IEEGIEAWNL 540 ISQKNDHVLW ENLLSGVKEH FMKIVPCGTR SLTHQDLELL RRISGCQELV SQDHFEKMWF 600 WLYPVALSLS QVWINALWSS ASPKWIEGFI TKEEAESSLQ GPGGFQEPGT FVLRFPTSRS 660 WPHPDAGNLV ITYIGSDYAI HHRLLSLDLM YSSRDRTVRP LQDMLLEEPE LSRLGRIQRI 720 H

Sequence ? help Back to Top

Protein Sequence Length: 721 aa Download sequence

MVKILDGANV LEEMNYGLLK DLRVELKDSD TEENGAFCFS FWLYLANYGS PLPCGILHQE  60
HIDINSSVPF LLLNEKKKMM LLPVIFLHKE ASMLVGLNPL TEVPSVVTQF DIPLKKWVHV  120
GCEASQNSLR LRVNGEIVGE KHLSPVLNDE LHADGMKRRA LPCIIGEYQG FQGYVHFAKL  180
SPSGLPLKTH CIEDPPLQLS IDSSSASDIE EDSDGIWSIV GGKASCRRNF SLDVTLLDAF  240
DQPLIKEMEV VASLLYADNN EPVPETNDGE APLLTSYDGI EYASSDRPSK LISGRASFKL  300
KMSQLSSKCD NRLFRIRFEI PKIRYPFLEA FSPPIRCISR SRNARASSIT LKKLPSGVHL  360
LNGSQSPGLD DRSSELLNSV VREAKPSPSS KRVKLGQEKP FEIFADSFTS KRADKECKSY  420
AFTTTEGNHT YGSNLVRKPE NHDGSDNFSS DSETSETTKS DLMSIPSSTN QLSDMVVFKY  480
CLGGLSERAV LLKEIALSAR EEELVKFADQ VSLFSGCSHH RHQIMIAKRL IEEGIEAWNL  540
ISQKNDHVLW ENLLSGVKEH FMKIVPCGTR SLTHQDLELL RRISGCQELV SQDHFEKMWF  600
WLYPVALSLS QVWINALWSS ASPKWIEGFI TKEEAESSLQ GPGGFQEPGT FVLRFPTSRS  660
WPHPDAGNLV ITYIGSDYAI HHRLLSLDLM YSSRDRTVRP LQDMLLEEPE LSRLGRIQRI  720
H

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78540.1	0.0	STAT family protein