PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027127132.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 130aa    MW: 14504 Da    PI: 5.9846
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027127132.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.11e-181969255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +++GVr ++ +g+++AeIrd ++ng  +r +lg+f taeeAa+a+++a+ + +g
  XP_027127132.1 19 RFRGVRKRP-WGKYAAEIRDMNNNG--ARLWLGTFATAEEAARAYDRAAFATRG 69
                    69*******.**********65555..**********************98877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 130 aa     Download sequence    
MADQRGGNKS KDDKEGEVRF RGVRKRPWGK YAAEIRDMNN NGARLWLGTF ATAEEAARAY  60
DRAAFATRGS LAVLNFPEEY PSSSSLPSSS SSSSSHVNPN VGREVIEFEY LDDKVLEDLL  120
QVEENKTTKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.18e-27ERF family protein