PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027127316.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 222aa    MW: 23587.3 Da    PI: 8.836
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027127316.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.52.2e-202473255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +++GVr ++ +gr++AeIrdp   gk+ r++lg+f+taeeAa+a++aa++ ++g
  XP_027127316.1 24 HFRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAARAYDAAARDFRG 73
                    69*******.**********8...557**********************99988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MAMKEKSKDV KPSTGKANAV KEVHFRGVRK RPWGRYAAEI RDPGKKSRVW LGTFDTAEEA  60
ARAYDAAARD FRGPKAKTNF PSPSEIQSPS NSSTVESSSG DGPTHAPVEL DLTRRLGVAA  120
GGGGAGSEIP ILHHPQAMAV LPNGQPVVFF QPMALNRADY PYRFGPVAMD YANVVGRGRG  180
GGAVHSDSDT SSVVDDNISD GDNMKRGGGL DLDLNFPPPV EA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.13e-25ERF family protein