PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027127444.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

SBP

Protein Properties

Length: 225aa MW: 25360.8 Da PI: 6.325

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027127444.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	130.1	7.7e-41	105	179	2	76
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 C++e+C+adl++ k+yh+rhkvCe h+ka+vv+v+gl+qrfCqqCsrfh+lsefDe+krsCrrrLa+hnerrrk+ XP_027127444.1 105 CRAENCKADLTDSKSYHKRHKVCEYHAKAEVVVVEGLKQRFCQQCSRFHDLSEFDEAKRSCRRRLAGHNERRRKH 179 9************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 225 aa Download sequence
MEPHMHHLRQ SSSAVHSPFA PTKKVTEEAE TDTEEEEEEE EEVEEEEEEE EDGNGGFGAE 60 IEVEPELKKK RMNFDEGPRK RGSRTAAEGA GGGGGAVAVA PPPGCRAENC KADLTDSKSY 120 HKRHKVCEYH AKAEVVVVEG LKQRFCQQCS RFHDLSEFDE AKRSCRRRLA GHNERRRKHF 180 TESRGEGSGR RGSNPGAKKD QCRQVDERGR TPIVLPENHQ KLHIH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33810.1	1e-36	SBP family protein