PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027127802.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 261aa    MW: 28731.3 Da    PI: 4.8304
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027127802.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.46.5e-17115162253
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53 
                     ++kGVr+++  g+WvAeIrdp     +  ++++lg+f +aeeAa+a+++   ++
  XP_027127802.1 115 HFKGVRQRS-AGKWVAEIRDP-----HqgRSVWLGTFTSAEEAARAYDRKCIQF 162
                     69****999.8*********7.....336*******************876555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MYRFSDQTSE ELFKDEVDKC IVSALQHVIS NTEAAAPPTA PTHQQQPTVM PEFEGATSLS  60
QSSATASSGL GSSSTGTMME DNDDQSRNDE KQKQKNKKKK KKKREVELDG EKRVHFKGVR  120
QRSAGKWVAE IRDPHQGRSV WLGTFTSAEE AARAYDRKCI QFRGDRAKTN FPSSDYANAN  180
DDQSSGSQQQ QQQQDAPPPA AALLSVNAPL EYTSAVTTNS TTTAADAGGT SWEEDEGFWD  240
VFQILSDTDW RMMDSPPPSG P
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
197103KKKKKKK
298104KKKKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13330.19e-23ERF family protein