PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027148519.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ZF-HD
Protein Properties Length: 269aa    MW: 29340.3 Da    PI: 8.0275
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027148519.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer101.75.1e-3264119359
     ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 
                     ++r++eClkNhA+++GghavDGCgEfm++ geegt ++lkCaAC+CHRnFHR+e+e 
  XP_027148519.1  64 SYRFRECLKNHAVAIGGHAVDGCGEFMAA-GEEGTLESLKCAACNCHRNFHRKETEG 119
                     689*************************9.999*********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MEFDEHEEQE EEIGMHQMQA GNYQTLGNSA GRGGGGGEGV SAATTARKSG GGVGSMATTS  60
TTTSYRFREC LKNHAVAIGG HAVDGCGEFM AAGEEGTLES LKCAACNCHR NFHRKETEGE  120
GFHQPHPTPH HPHHHHPHHA HHQFSPAYPF RSPHPSGYLH VTPPSHHHHQ RPLPLPSTSR  180
EDEDVSNPSS SGGGGGGGSG GAGGSKKRFR TRFTQDQKEK MLAFAERLGW RIQKQDEALV  240
QQFCADTNVK RHVLKVWMHN NKHTLGKKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.12e-66ZF-HD family protein