PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027148709.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

Protein Properties

Length: 986aa MW: 110714 Da PI: 8.6289

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027148709.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	54.1	2.9e-17	16	100	9	100
HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-SS CS B3 9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrks 100 ++ +s l lp kf ++++g +++ t l +sg++W +l +++ + +l++GW Fv+++ L++gD++vF++dg+ f +v+vf+ks XP_027148709.1 16 SS-SSEALKLPFKFKKHIDGTTPG--TAFLLGPSGNTWYANL--TQQNDDLFLQDGWVAFVRDHSLESGDSLVFRYDGNLHF--TVQVFDKS 100 44.44559****9888888555..8***********..999999**********************997777..9*9985 PP
2	B3	50.3	4.2e-16	248	342	1	98
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 f kv+++ + + s l +p +fa +h ++++++++l +++g+sW+++ i ++ + ++++ +GW +Fv++n+++egD+++F+l+++ e +v XP_027148709.1 248 FMKVMKRFNISGSYTLNVPYQFAMAHL--PKCKVKIVLHNLKGESWTINSIPtTRVQTSHTFCGGWLGFVRDNNINEGDICIFELVHKCEL--RV 338 66777777777888899****9995..35999************77566666699*********************9985444..77 PP EEE- CS B3 95 kvfr 98 +++r XP_027148709.1 339 HIVR 342 7765 PP
3	B3	50.1	5.1e-16	461	553	1	96
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 f+ v+++ +v+ s l +p +f +h + + ++++l++++g+ W+v+ i + k ++ +++ +GW Fv++n+++ gD+++F+l+g++e +v XP_027148709.1 461 FVRVMKKFNVSGSYTLKIPYQFSMQHL--PSCRTEVILRNLKGKCWTVNSIPTIKVQTlHTFCGGWMAFVRDNDIQMGDICIFELIGKNEL--RV 551 667778888999999*****98885..45889************998888888999**********************96555..66 PP EE CS B3 95 kv 96 ++ XP_027148709.1 552 HI 553 55 PP
4	B3	43	8.1e-14	867	950	1	87
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr 87 f+ v+ p +v + l +p + a++++ + +s++ltl+ + ++W+v++ y++ ++ l++GWk+Fv++n L+e D+++F l+ g XP_027148709.1 867 FIVVMRPTHVYRGFYLQIPSEWATKYMPN--RSQDLTLQV-KDKTWKVRF-YKRDYRTGGLAGGWKRFVHENFLEEFDVCLFNLVtGA 950 7889999*****************866..566677555.66***.7666666789********************87444 PP

Sequence ? help Back to Top
Protein Sequence Length: 986 aa Download sequence
MWDDKKPHFL VGFNPSSSSE ALKLPFKFKK HIDGTTPGTA FLLGPSGNTW YANLTQQNDD 60 LFLQDGWVAF VRDHSLESGD SLVFRYDGNL HFTVQVFDKS SCEKESTFSC ECSQSPSNYN 120 CRLMKKRDRE NSALLDCIIE GIPKRVRTSQ VNTQCITTIQ ELNRDLTDKN ECSEEEAGYF 180 SERCQEPNFL NQIENGSCTL KNSVTIAVPS VRNSEATTGE RTGKEDLLLS APEAERVARA 240 FTSSLPCFMK VMKRFNISGS YTLNVPYQFA MAHLPKCKVK IVLHNLKGES WTINSIPTTR 300 VQTSHTFCGG WLGFVRDNNI NEGDICIFEL VHKCELRVHI VRVRREGVND RSENEAHKMM 360 VNSSCATPLK ISRRKAMKIS TKPCNLSLQQ LKKFDKKGHD PIKVKCGNES ISGELVESLT 420 VIYETSSQGR SSSHTKGCIS MKSAPEEKLA AESFLSSFPH FVRVMKKFNV SGSYTLKIPY 480 QFSMQHLPSC RTEVILRNLK GKCWTVNSIP TIKVQTLHTF CGGWMAFVRD NDIQMGDICI 540 FELIGKNELR VHISGVGQQG SDNQSGRVGS NAVVPAKDQV HVEKAIFANF HADCSISCNL 600 LKFLINLVVR SENVDTLIRV AKTNVFMEGG CALYLCVLTE NAVSSISSVV NSIKLSRSWA 660 CRKWEEEISL AHFQSAQFFQ TLSAVIIENQ LAIPQKFANN LKEKLVGAVS LKGPSGLEWK 720 AGLTMIDDTL YLKEGWKYDA NCVYVGASRF DVLMFDYQSL CEKESSYFIK RCENGGTDGG 780 CKRKDNSTET IEVTNEASHD VSESTPSKRP GKHGALPPRS RGRQRGTCSS INRSVFSGPA 840 SHRRQVTEED KDKALKMACA SASENSFIVV MRPTHVYRGF YLQIPSEWAT KYMPNRSQDL 900 TLQVKDKTWK VRFYKRDYRT GGLAGGWKRF VHENFLEEFD VCLFNLVTGA TDDIVMDVSI 960 FKVVEGVIPV TRLPPINLKG RKPMKI

Sequence ? help Back to Top

Protein Sequence Length: 986 aa Download sequence

MWDDKKPHFL VGFNPSSSSE ALKLPFKFKK HIDGTTPGTA FLLGPSGNTW YANLTQQNDD  60
LFLQDGWVAF VRDHSLESGD SLVFRYDGNL HFTVQVFDKS SCEKESTFSC ECSQSPSNYN  120
CRLMKKRDRE NSALLDCIIE GIPKRVRTSQ VNTQCITTIQ ELNRDLTDKN ECSEEEAGYF  180
SERCQEPNFL NQIENGSCTL KNSVTIAVPS VRNSEATTGE RTGKEDLLLS APEAERVARA  240
FTSSLPCFMK VMKRFNISGS YTLNVPYQFA MAHLPKCKVK IVLHNLKGES WTINSIPTTR  300
VQTSHTFCGG WLGFVRDNNI NEGDICIFEL VHKCELRVHI VRVRREGVND RSENEAHKMM  360
VNSSCATPLK ISRRKAMKIS TKPCNLSLQQ LKKFDKKGHD PIKVKCGNES ISGELVESLT  420
VIYETSSQGR SSSHTKGCIS MKSAPEEKLA AESFLSSFPH FVRVMKKFNV SGSYTLKIPY  480
QFSMQHLPSC RTEVILRNLK GKCWTVNSIP TIKVQTLHTF CGGWMAFVRD NDIQMGDICI  540
FELIGKNELR VHISGVGQQG SDNQSGRVGS NAVVPAKDQV HVEKAIFANF HADCSISCNL  600
LKFLINLVVR SENVDTLIRV AKTNVFMEGG CALYLCVLTE NAVSSISSVV NSIKLSRSWA  660
CRKWEEEISL AHFQSAQFFQ TLSAVIIENQ LAIPQKFANN LKEKLVGAVS LKGPSGLEWK  720
AGLTMIDDTL YLKEGWKYDA NCVYVGASRF DVLMFDYQSL CEKESSYFIK RCENGGTDGG  780
CKRKDNSTET IEVTNEASHD VSESTPSKRP GKHGALPPRS RGRQRGTCSS INRSVFSGPA  840
SHRRQVTEED KDKALKMACA SASENSFIVV MRPTHVYRGF YLQIPSEWAT KYMPNRSQDL  900
TLQVKDKTWK VRFYKRDYRT GGLAGGWKRF VHENFLEEFD VCLFNLVTGA TDDIVMDVSI  960
FKVVEGVIPV TRLPPINLKG RKPMKI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33280.1	3e-41	B3 family protein