PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027148710.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family B3
Protein Properties Length: 171aa    MW: 18917.3 Da    PI: 7.9444
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027148710.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B344.62.6e-14881473387
                     -SEEEEEETTS-EEEEEE.......EEETTE....EEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
              B3  33 sktltledesgrsWevkliy.....rkksgr....yvltkGWkeFvkangLkegDfvvFkldgr 87 
                     ++ +tl++ sg +W+vkl+      +    +    +v++kGW +F  +n+Lk gD+++F+ld++
  XP_027148710.1  88 KTSVTLRNASGGEWQVKLTAyrtgyK----AaytqVVMAKGWGDFHMSNQLKIGDVCLFELDRS 147
                     346***************66553333....245669************************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MVFEHTGGMV FKTYEFDPSA CEKEYSSAGS ENLTTNKVPC AQPRTLPNVA GIKDAEEEAE  60
EAVGSYNPDN PHFRRTINRR NLRCNILKTS VTLRNASGGE WQVKLTAYRT GYKAAYTQVV  120
MAKGWGDFHM SNQLKIGDVC LFELDRSTTL GSPSNAVMNV RVLSNNIPST S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31640.12e-11B3 family protein