PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027149289.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

TALE

Protein Properties

Length: 681aa MW: 75556.2 Da PI: 5.577

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027149289.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.8	2.2e-09	433	470	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +e+ LA+++gLt +qV +WF N R + XP_027149289.1 433 FEHflHPYPKDSEKIMLARQTGLTRSQVANWFINARVR 470 554459******************************88 PP
2	BELL	114.4	6e-37	296	367	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 er++lq+k +kL s+l+eVd+rYkqy++q+q+++ssFe+vag+g+a++Yt+lA ++iSr+FrcL+d i++qi XP_027149289.1 296 ERNDLQNKLTKLFSMLDEVDRRYKQYYQQMQVLVSSFEIVAGCGAARSYTALARRTISRQFRCLRDSIKNQI 367 7899******************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 681 aa Download sequence
MSAYYPNLTS QQDVLQTQYL LNPKLTSYQS SDLPEIIYPN PPSTASLRPE LFSGTSLQAH 60 NFVEAQSVES REEMLFIAPH GNPVMMQPIN EHLNFAPNFS DSNAVVVDQI FTKKLLHLQN 120 ADQNLQNQGL SLSLGSQAAS SVEMPSYQNP YSNSGLSSLL SSHVEHLVDR FSESSELKTA 180 EYLSFDLAGR VNNSSKVGAV YEPQSSLSSK GINSDPKLHE ETVVSGAIYN SKYLKAAKEL 240 LDEVVNVHQA LNQSEKCNEF QSSGLGVTEA TKLKAEYQSG IPSKTGISSD VLSPAERNDL 300 QNKLTKLFSM LDEVDRRYKQ YYQQMQVLVS SFEIVAGCGA ARSYTALARR TISRQFRCLR 360 DSIKNQIQVV QQSLGEEGTV PNGQGGGLSR LRHLDQQLRQ QRALQQFGVM RQPWRPQRGL 420 PETAVSVLRA WLFEHFLHPY PKDSEKIMLA RQTGLTRSQV ANWFINARVR LWKPMIEEMY 480 KEEFVDMEAD SKSSQEHGQP TGRLKSESED TGEELHESLM SPSADGGRLA QSSELRNDVT 540 SDLKVHAYAT RMGFQAGSLE ENDMDHVNKS SRDDVVSMAD HKVGAIETIR SNQTGEVSIS 600 SDANAHNFCM LAGPVGNQVS LALGLQHPSK DSQPISDGTH TGVDDTVASS VGLDKAEYYC 660 LDAINQQERF SHPHLLSDFV L

Sequence ? help Back to Top

Protein Sequence Length: 681 aa Download sequence

MSAYYPNLTS QQDVLQTQYL LNPKLTSYQS SDLPEIIYPN PPSTASLRPE LFSGTSLQAH  60
NFVEAQSVES REEMLFIAPH GNPVMMQPIN EHLNFAPNFS DSNAVVVDQI FTKKLLHLQN  120
ADQNLQNQGL SLSLGSQAAS SVEMPSYQNP YSNSGLSSLL SSHVEHLVDR FSESSELKTA  180
EYLSFDLAGR VNNSSKVGAV YEPQSSLSSK GINSDPKLHE ETVVSGAIYN SKYLKAAKEL  240
LDEVVNVHQA LNQSEKCNEF QSSGLGVTEA TKLKAEYQSG IPSKTGISSD VLSPAERNDL  300
QNKLTKLFSM LDEVDRRYKQ YYQQMQVLVS SFEIVAGCGA ARSYTALARR TISRQFRCLR  360
DSIKNQIQVV QQSLGEEGTV PNGQGGGLSR LRHLDQQLRQ QRALQQFGVM RQPWRPQRGL  420
PETAVSVLRA WLFEHFLHPY PKDSEKIMLA RQTGLTRSQV ANWFINARVR LWKPMIEEMY  480
KEEFVDMEAD SKSSQEHGQP TGRLKSESED TGEELHESLM SPSADGGRLA QSSELRNDVT  540
SDLKVHAYAT RMGFQAGSLE ENDMDHVNKS SRDDVVSMAD HKVGAIETIR SNQTGEVSIS  600
SDANAHNFCM LAGPVGNQVS LALGLQHPSK DSQPISDGTH TGVDDTVASS VGLDKAEYYC  660
LDAINQQERF SHPHLLSDFV L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16400.1	1e-100	TALE family protein