PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027149513.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family WRKY
Protein Properties Length: 218aa    MW: 24815.9 Da    PI: 6.5015
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027149513.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.49.6e-31134192159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDg++WrKYG+K+vk++++pr+YY+C+++gC+vkk+ver+ edp+++++tYeg+Hnhe
  XP_027149513.1 134 LDDGFKWRKYGKKKVKSNPNPRNYYKCSTEGCKVKKRVERDVEDPSYLVTTYEGRHNHE 192
                     59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MFNSPFLPPP EPGISIHHDT VIPSTYTSDY LLDKYFTDHL GSQELSHYLD IPDHGQLLIN  60
NVHEDSNSSL TACVHPTLFT QEMTSTTGSS ASCMDGMPIN SYMEEDHCKR VMKRAKVDQG  120
NVIAIRTKTQ LEILDDGFKW RKYGKKKVKS NPNPRNYYKC STEGCKVKKR VERDVEDPSY  180
LVTTYEGRHN HEGPCFIYCD ELPLAISYGW TLQPSQSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64810.18e-40WRKY family protein