PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027149869.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NAC
Protein Properties Length: 317aa    MW: 36734.4 Da    PI: 6.1123
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027149869.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM173.46.6e-5471351128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                     +ppGfrFhPt+eelv +yL++kv++ k++l +vi ++d+y++ePwd++      ++e++ewyfFs++d+ky+tg+r+nrat++g+Wkatg+dk+v
  XP_027149869.1   7 VPPGFRFHPTEEELVGYYLNRKVNSLKIDL-DVIVDIDLYRMEPWDIQDrckLGYEEQNEWYFFSHKDRKYPTGTRTNRATAAGFWKATGRDKAV 100
                     69****************************.99**************952432234677************************************ PP

             NAM  93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +s k++ +g++ktLvfykgrap+g+ktdW+mheyrl
  XP_027149869.1 101 IS-KEKIIGMRKTLVFYKGRAPNGRKTDWIMHEYRL 135
                     **.9999***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MEMESCVPPG FRFHPTEEEL VGYYLNRKVN SLKIDLDVIV DIDLYRMEPW DIQDRCKLGY  60
EEQNEWYFFS HKDRKYPTGT RTNRATAAGF WKATGRDKAV ISKEKIIGMR KTLVFYKGRA  120
PNGRKTDWIM HEYRLQTSEQ GPSQEEGWVV CRAFKKPCPS HKQGFEAWSN AYYIRENGKY  180
QPPFPDKSIT SMHAVNPISI RGVDFQQVPL RADHHELISN HAARFDNQLI EIPQLDSPSI  240
STSLATKDQI FESGSLVNED GEDVKSNIYC QQYNDWKVFD KLLVQQVIDP SASYACQNQP  300
VLIPRDDELL LGCFTEF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71930.13e-99NAC family protein