PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027150059.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 146aa    MW: 16553.2 Da    PI: 4.568
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027150059.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.62.4e-162167151
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51
                    ++y GVr++  +gr++AeIr p++   + r++lg+f+taeeAa a++ a  
  XP_027150059.1 21 TRYLGVRRRQ-WGRYAAEIRNPYT---KERHWLGTFDTAEEAAVAYDLASI 67
                    5799***887.**********865...5*******************9965 PP
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    
MENFSQMVAR DQGRRSSRRS TRYLGVRRRQ WGRYAAEIRN PYTKERHWLG TFDTAEEAAV  60
AYDLASISFS GIQKARTNFV YPFLALPTPS PPSPPPPPPP TPDLEEVDQS CAEVSSFEDD  120
DDDESLFIAS VLESFRQSSF DGIQKD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18560.14e-29ERF family protein