PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027150181.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 195aa    MW: 21371.7 Da    PI: 4.393
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027150181.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2582.3e-181868155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    s y+GVr ++ +g+Wv+eIr+p   gk++r++lg+f+t+e+Aa a++aa+  ++g
  XP_027150181.1 18 SVYRGVRKRR-WGKWVSEIREP---GKKTRIWLGSFDTEEMAAVAHDAAAYFFRG 68
                    78*****887.**********8...557**********************99997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
MENNNNNINN NGGTGSPSVY RGVRKRRWGK WVSEIREPGK KTRIWLGSFD TEEMAAVAHD  60
AAAYFFRGSA AQLNFPVLVG NLPRPASSSA EDIRMAAQEA SLLVKNLSGD QHNGGHQAAS  120
GSSSNMANPI DTQPLTVGLS PVQIQAINDL PLESPDYKRW MEMASGSEVL EEPMIFPDDY  180
DMADYEEIPD DSLWG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71450.11e-47ERF family protein