PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027150252.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NAC
Protein Properties Length: 233aa    MW: 26210.9 Da    PI: 8.6838
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027150252.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM514.9e-1661442128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy..kvePwdLpk.............kvkaeekewyfFskrdkkyatgkrknratksg 81 
                     p GfrF+P++eel+   L  kv+++  e+ +++ke  +y   +ePwd                k +++++ +y F+k +k +a  k++ r++  g
  XP_027150252.1   6 PIGFRFRPSEEELI-SLLWLKVTNQLDET-DHVKEKILYgeGAEPWDVLGdddvrwqfcddsgKGASTKRMVYVFTKLRKLSA--KKAARTAGLG 96 
                     89************.88999999988777.6777776662257****963468889988876543345557799999988765..6899999*** PP

             NAM  82 yWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +W    k+ +v    +ge++g +++L +  ++ +  +k  W++hey l
  XP_027150252.1  97 TWDGETKSYPVEGMiTGEKIGSRRMLSYVLNSGSIRVKGGWIIHEYWL 144
                     ***999999998878999***********99999999*********87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MADNIPIGFR FRPSEEELIS LLWLKVTNQL DETDHVKEKI LYGEGAEPWD VLGDDDVRWQ  60
FCDDSGKGAS TKRMVYVFTK LRKLSAKKAA RTAGLGTWDG ETKSYPVEGM ITGEKIGSRR  120
MLSYVLNSGS IRVKGGWIIH EYWLDGALLN GLNNSHNTDY VLCRIIKDDS KYTKVKESAK  180
KGKVAKEKEV GNRGCREVVL GKRKMNLEQE SSQASKKSCS NPMDELPNLV NCD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54330.12e-09NAC family protein