PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027150269.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 375aa MW: 43004.1 Da PI: 7.7147

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027150269.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	76.4	5.9e-24	26	113	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 kfYn+YA ++GFsvrk++ +k ++g +t+r++ C keg +++ + + + +rtra t+tgC ak+++ + + + k++v++l+leHnHel XP_027150269.1 26 KFYNKYAFKMGFSVRKDYLNKD-KDGVTTSRRYSCCKEGVKRKYEGD-VMPKRTRAPTKTGCGAKMVIVLFRgTMKYRVHDLVLEHNHEL 113 6***************9998.8999************9999.999***************999**************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 375 aa Download sequence
MDCSKLAEDG TPELGMEFNS EEDAYKFYNK YAFKMGFSVR KDYLNKDKDG VTTSRRYSCC 60 KEGVKRKYEG DVMPKRTRAP TKTGCGAKMV IVLFRGTMKY RVHDLVLEHN HELHIAQCAH 120 MMPSQRKVSE AQGFQAEISE DAGLSLKQSH ELMGKEAGGM GNMGYTREDL KLYLRTRRER 180 SLKYGEAGSM LNYFQEQTLE NPSFFHAVQL DCEEQITNIF WADAGMLIDY KFFGDVVTFD 240 TTYKTNKEYR PLGVFVDFNQ HRQIVIFGAA LMYDETIDSF KWVFGTFLET MCGKRPSTIL 300 TDQDHAMAAA LSVVMPETFH GLCTFHIRRN FMKHLGNHYK ENSDLPYMFG ACIERQRPRR 360 LCAVVTKADS SSSGC

Sequence ? help Back to Top

Protein Sequence Length: 375 aa Download sequence

MDCSKLAEDG TPELGMEFNS EEDAYKFYNK YAFKMGFSVR KDYLNKDKDG VTTSRRYSCC  60
KEGVKRKYEG DVMPKRTRAP TKTGCGAKMV IVLFRGTMKY RVHDLVLEHN HELHIAQCAH  120
MMPSQRKVSE AQGFQAEISE DAGLSLKQSH ELMGKEAGGM GNMGYTREDL KLYLRTRRER  180
SLKYGEAGSM LNYFQEQTLE NPSFFHAVQL DCEEQITNIF WADAGMLIDY KFFGDVVTFD  240
TTYKTNKEYR PLGVFVDFNQ HRQIVIFGAA LMYDETIDSF KWVFGTFLET MCGKRPSTIL  300
TDQDHAMAAA LSVVMPETFH GLCTFHIRRN FMKHLGNHYK ENSDLPYMFG ACIERQRPRR  360
LCAVVTKADS SSSGC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	4e-64	FAR1 family protein