PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027150399.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NF-YB

Protein Properties

Length: 189aa MW: 21306.1 Da PI: 5.9577

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027150399.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	78.7	7.9e-25	1	79	17	95
NF-YB 17 mkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 m++++ na++ k+ak t++ecv + i f+t ea+++ + e+ kti+++dl +a a+lGf++yv ++++yl++yr+ e+ XP_027150399.1 1 MRHIFLPNARVFKEAKSTIEECVLKDINFITMEANERYHSEHCKTITAKDLTYAHANLGFDNYVSAITLYLERYRQNEA 79 77888889*******************************************************************9886 PP

Sequence ? help Back to Top
Protein Sequence Length: 189 aa Download sequence
MRHIFLPNAR VFKEAKSTIE ECVLKDINFI TMEANERYHS EHCKTITAKD LTYAHANLGF 60 DNYVSAITLY LERYRQNEAG QNTMHGDDFE RHTTIFPNVH TQGHPSMLAP APSPLPPINS 120 TFQVGADEQA FFNPTLMSKE FYFQNSPGAS HGDGFDVVGP SSNAEFPTAF FPMIFIQGLL 180 FHMGLILMV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G47670.2	4e-22	NF-YB family protein