PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027150526.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 188aa MW: 21401 Da PI: 8.0908

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027150526.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	82.3	1e-25	25	143	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 p G+rF+Ptdeel+ yL++k+ g + +l + i+++d++ + P++Lp + ++ k+w+f++ ++ t +gyW t + ++++ XP_027150526.1 25 PCGCRFDPTDEELM-VYLRNKIMGGRDDLPDYISTADVFGTSPNQLPfDrCEYSAGKKWFFYTVGQN-------DDVFTGDGYWTPTSE-EAICI 110 89**********.8*********999***********63455567889999998655.......456899***87.66777 PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 +g++ g kk +++y g+++ g++t+W +h++rl XP_027150526.1 111 -DGQVDGYKKEFIYYCGTEHPGNRTNWYIHQFRL 143 .799**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 188 aa Download sequence
MEKPSAASAG GNNDNRGKRT PVEVPCGCRF DPTDEELMVY LRNKIMGGRD DLPDYISTAD 60 VFGTSPNQLP FDRCEYSAGK KWFFYTVGQN DDVFTGDGYW TPTSEEAICI DGQVDGYKKE 120 FIYYCGTEHP GNRTNWYIHQ FRLNPDVYGA SAVGNVDYKI SSVVACMVFR KEVVVQSNRR 180 KRKRKRKN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	179	184	RRKRKR
2	179	185	RRKRKRK
3	179	187	RRKRKRKRK
4	180	185	RKRKRK
5	180	186	RRKRKRK
6	181	187	RRKRKRK
7	182	187	RKRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17260.1	4e-19	NAC family protein