PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027150533.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family FAR1
Protein Properties Length: 121aa    MW: 14258.7 Da    PI: 5.2975
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027150533.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1293.4e-092671147
            FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk 47
                    kfYn+YA ++ Fs rk++ +k  ++g +t r++ C keg +++ + +
  XP_027150533.1 26 KFYNKYAFKMDFSRRKDYLNKD-KDGVTTYRRYSCCKEGVKRKYEGD 71
                    6*****************9998.8899************99988776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 121 aa     Download sequence    
MNCSKLTEDR IPELGTEFNS EEDAYKFYNK YAFKMDFSRR KDYLNKDKDG VTTYRRYSCC  60
KEGVKRKYEG DVSELESTSV SFDEHMFMGY RSSTDSVSER NNTYGLRLTT HINSTQLQVD  120
E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.19e-09FAR1 family protein