PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027150606.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family B3
Protein Properties Length: 256aa    MW: 29471.2 Da    PI: 10.7907
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027150606.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B338.71.8e-12145240282
                     EEE-..-HHHHT.T-EE--HHH.HTT............---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEE CS
              B3   2 fkvltpsdvlks.grlvlpkkfaeeh............ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvv 81 
                     +k l psdv+++ +rl++p k +++h            +g+k+e+++ +l  +s  + +++++      sg+y+lt+GW++ v+ ngLk+g  v 
  XP_027150606.1 145 EKSLFPSDVSAKlHRLSIPVKQVANHeflteeerkrfnNGNKQEKIDAILVEPSLSESKIRFKKwyIHDSGMYILTSGWNDVVERNGLKQGTLVQ 239
                     68999****9888*************************8888899999999987765555553323889999*******************8876 PP

                     E CS
              B3  82 F 82 
                     +
  XP_027150606.1 240 L 240
                     5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MAILSSQKRE EMRRNESFRR RPRKSSKPCR ASTNSVADQF RFWPFLVEKT EAPTQKSCVN  60
KGKKMIGLAL PNLDQELPSK KSCGKLRAEA KTSQESRKIE IIFKKKLVKA KAQVFPPPSA  120
QLPTDFKNYM SRKLGATGDP VLVIEKSLFP SDVSAKLHRL SIPVKQVANH EFLTEEERKR  180
FNNGNKQEKI DAILVEPSLS ESKIRFKKWY IHDSGMYILT SGWNDVVERN GLKQGTLVQL  240
WSFRKESQLY FALIRL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11924RRRPRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05930.14e-14B3 family protein