PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027150687.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

bHLH

Protein Properties

Length: 161aa MW: 17791.7 Da PI: 9.0267

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027150687.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	21.1	5.5e-07	1	79	8	52
HHHHHHHHHHHHHHHHHCTSCC.C...................................TTS-.STCHHHHHHHHHHHH CS HLH 8 rErrRRdriNsafeeLrellPk.as................................kapskK.lsKaeiLekAveYIk 52 +Er RR+++++ +++L +ll + as k +++ s a+i+ +Av+ I XP_027150687.1 1 MERHRRQQMKNLYSKLASLLLPpASevnlplpalldyslthvknlkeriqeleakkeKLKGEIgSSTADIVLQAVKIIE 79 6*****************99677************************999999999999********9996 PP

Sequence ? help Back to Top
Protein Sequence Length: 161 aa Download sequence
MERHRRQQMK NLYSKLASLL LPPASEVNLP LPALLDYSLT HVKNLKERIQ ELEAKKEKLK 60 GEIGSSTADI VLQAVKIIEK GPILEVNLET GLHKRFILPE VISILEEGGA QVLSASYATL 120 TDRVLYTISS EASSPRIGIE TSRLHDRLKA LGGTGCFFSS L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10585.1	2e-17	bHLH family protein