PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027151347.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

CAMTA

Protein Properties

Length: 978aa MW: 109472 Da PI: 5.9473

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027151347.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	172.1	8.2e-54	12	127	2	116
CG-1 2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfq 95 ++e ++rwlk+ e++ iL+n+e+ +t+e++++p sgsl+L+n++++r+frkDG+sw++k+dg+tv E+he+LKvg+ve+l+cyYah+e+np+fq XP_027151347.1 12 VREaQSRWLKPAEVLFILQNHENQMITNEPPQKPGSGSLFLFNKRVLRFFRKDGHSWRRKRDGRTVGEAHERLKVGNVEALNCYYAHGEQNPNFQ 106 45669**************************************************************************************** PP CG-1 96 rrcywlLeeelekivlvhyle 116 rr+yw+L+ ++e+ivlvhy++ XP_027151347.1 107 RRSYWMLNPAYEHIVLVHYRD 127 *****************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 978 aa Download sequence
MSQSGYNLND LVREAQSRWL KPAEVLFILQ NHENQMITNE PPQKPGSGSL FLFNKRVLRF 60 FRKDGHSWRR KRDGRTVGEA HERLKVGNVE ALNCYYAHGE QNPNFQRRSY WMLNPAYEHI 120 VLVHYRDISE LQARNNAGTI SQFSPISSST FSQSPISGNT QQLGTSPLLG ESYEQIHNLS 180 SPGSVEFSSS VVIKSNGMNY SQDIERTEEV TSSSSHDISQ ALRRLEEQLS LNDDRLEEIG 240 NCYTQNENSH DSEKSTQGQT PSVPGQGYEI EHQQQSLGHE DWTEMLDGCN SSEDVLAQVR 300 HVDKFDRNVR MNNHYEHSSS ACVGVLLDEW TKELVAEQDG YTWLDYGGTN AQDVSLPVAK 360 EVQNLAYPAY SAAVKTYMTN PDNYTTLFDH NQIGISLEED LGLTIAQKQK FTIQEISPEW 420 VYASETTKVF IIGSFLCDPL DAAWTCMFGD IEVPVQIIQE GVICCHAPPH SPGKVTICVT 480 SGNRESCSEV REFEYRVKPT VCSHCSQPQR EASRSPEEML LLVRFVQLLL SNPSMQKGDT 540 SESGVDLLGK SRADEDSWGQ VIEALLAGTS TLSITTDWLL EELVKDKLQN WLSSKSQDDN 600 MPCCSLSKKE QGVIHIISGL GFEWALHPIL KSGVNVNFRD INGWTALHWA ARFGREKMVA 660 ALIAAGASAG AVTDPNSKDP TGKTAASVAA TWGHKGLAGY LSEVALTSHL FSLTLEESEL 720 SKGSADVEAE RTLINIPKTS PTTNEDQLSL KDSLAAARNA AQAAARIQSA FRAHSFRRRQ 780 QIEFAISAAS STSRDEYGIL LSDIPELSAA SKFAFRNSRD YNSAALSIQK KYRGWKGRKD 840 FLAFRQKVVK IQAHVRGYQV RKNYKVCWAV GILEKVVLRW RRRGVGLRGF RLETDAIDES 900 EDEDILRVFR KQKVDATIDE AVSRVLSMVE SPGARQQYRR ILEKYRQAKA ELDGAEREIS 960 STSYDVSSMG NDDIYQFV

Sequence ? help Back to Top

Protein Sequence Length: 978 aa Download sequence

MSQSGYNLND LVREAQSRWL KPAEVLFILQ NHENQMITNE PPQKPGSGSL FLFNKRVLRF  60
FRKDGHSWRR KRDGRTVGEA HERLKVGNVE ALNCYYAHGE QNPNFQRRSY WMLNPAYEHI  120
VLVHYRDISE LQARNNAGTI SQFSPISSST FSQSPISGNT QQLGTSPLLG ESYEQIHNLS  180
SPGSVEFSSS VVIKSNGMNY SQDIERTEEV TSSSSHDISQ ALRRLEEQLS LNDDRLEEIG  240
NCYTQNENSH DSEKSTQGQT PSVPGQGYEI EHQQQSLGHE DWTEMLDGCN SSEDVLAQVR  300
HVDKFDRNVR MNNHYEHSSS ACVGVLLDEW TKELVAEQDG YTWLDYGGTN AQDVSLPVAK  360
EVQNLAYPAY SAAVKTYMTN PDNYTTLFDH NQIGISLEED LGLTIAQKQK FTIQEISPEW  420
VYASETTKVF IIGSFLCDPL DAAWTCMFGD IEVPVQIIQE GVICCHAPPH SPGKVTICVT  480
SGNRESCSEV REFEYRVKPT VCSHCSQPQR EASRSPEEML LLVRFVQLLL SNPSMQKGDT  540
SESGVDLLGK SRADEDSWGQ VIEALLAGTS TLSITTDWLL EELVKDKLQN WLSSKSQDDN  600
MPCCSLSKKE QGVIHIISGL GFEWALHPIL KSGVNVNFRD INGWTALHWA ARFGREKMVA  660
ALIAAGASAG AVTDPNSKDP TGKTAASVAA TWGHKGLAGY LSEVALTSHL FSLTLEESEL  720
SKGSADVEAE RTLINIPKTS PTTNEDQLSL KDSLAAARNA AQAAARIQSA FRAHSFRRRQ  780
QIEFAISAAS STSRDEYGIL LSDIPELSAA SKFAFRNSRD YNSAALSIQK KYRGWKGRKD  840
FLAFRQKVVK IQAHVRGYQV RKNYKVCWAV GILEKVVLRW RRRGVGLRGF RLETDAIDES  900
EDEDILRVFR KQKVDATIDE AVSRVLSMVE SPGARQQYRR ILEKYRQAKA ELDGAEREIS  960
STSYDVSSMG NDDIYQFV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	0.0	CAMTA family protein