PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027151348.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

CAMTA

Protein Properties

Length: 976aa MW: 109231 Da PI: 5.9473

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027151348.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	172.1	8.1e-54	12	127	2	116
CG-1 2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfq 95 ++e ++rwlk+ e++ iL+n+e+ +t+e++++p sgsl+L+n++++r+frkDG+sw++k+dg+tv E+he+LKvg+ve+l+cyYah+e+np+fq XP_027151348.1 12 VREaQSRWLKPAEVLFILQNHENQMITNEPPQKPGSGSLFLFNKRVLRFFRKDGHSWRRKRDGRTVGEAHERLKVGNVEALNCYYAHGEQNPNFQ 106 45669**************************************************************************************** PP CG-1 96 rrcywlLeeelekivlvhyle 116 rr+yw+L+ ++e+ivlvhy++ XP_027151348.1 107 RRSYWMLNPAYEHIVLVHYRD 127 *****************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 976 aa Download sequence
MSQSGYNLND LVREAQSRWL KPAEVLFILQ NHENQMITNE PPQKPGSGSL FLFNKRVLRF 60 FRKDGHSWRR KRDGRTVGEA HERLKVGNVE ALNCYYAHGE QNPNFQRRSY WMLNPAYEHI 120 VLVHYRDISE ARNNAGTISQ FSPISSSTFS QSPISGNTQQ LGTSPLLGES YEQIHNLSSP 180 GSVEFSSSVV IKSNGMNYSQ DIERTEEVTS SSSHDISQAL RRLEEQLSLN DDRLEEIGNC 240 YTQNENSHDS EKSTQGQTPS VPGQGYEIEH QQQSLGHEDW TEMLDGCNSS EDVLAQVRHV 300 DKFDRNVRMN NHYEHSSSAC VGVLLDEWTK ELVAEQDGYT WLDYGGTNAQ DVSLPVAKEV 360 QNLAYPAYSA AVKTYMTNPD NYTTLFDHNQ IGISLEEDLG LTIAQKQKFT IQEISPEWVY 420 ASETTKVFII GSFLCDPLDA AWTCMFGDIE VPVQIIQEGV ICCHAPPHSP GKVTICVTSG 480 NRESCSEVRE FEYRVKPTVC SHCSQPQREA SRSPEEMLLL VRFVQLLLSN PSMQKGDTSE 540 SGVDLLGKSR ADEDSWGQVI EALLAGTSTL SITTDWLLEE LVKDKLQNWL SSKSQDDNMP 600 CCSLSKKEQG VIHIISGLGF EWALHPILKS GVNVNFRDIN GWTALHWAAR FGREKMVAAL 660 IAAGASAGAV TDPNSKDPTG KTAASVAATW GHKGLAGYLS EVALTSHLFS LTLEESELSK 720 GSADVEAERT LINIPKTSPT TNEDQLSLKD SLAAARNAAQ AAARIQSAFR AHSFRRRQQI 780 EFAISAASST SRDEYGILLS DIPELSAASK FAFRNSRDYN SAALSIQKKY RGWKGRKDFL 840 AFRQKVVKIQ AHVRGYQVRK NYKVCWAVGI LEKVVLRWRR RGVGLRGFRL ETDAIDESED 900 EDILRVFRKQ KVDATIDEAV SRVLSMVESP GARQQYRRIL EKYRQAKAEL DGAEREISST 960 SYDVSSMGND DIYQFV

Sequence ? help Back to Top

Protein Sequence Length: 976 aa Download sequence

MSQSGYNLND LVREAQSRWL KPAEVLFILQ NHENQMITNE PPQKPGSGSL FLFNKRVLRF  60
FRKDGHSWRR KRDGRTVGEA HERLKVGNVE ALNCYYAHGE QNPNFQRRSY WMLNPAYEHI  120
VLVHYRDISE ARNNAGTISQ FSPISSSTFS QSPISGNTQQ LGTSPLLGES YEQIHNLSSP  180
GSVEFSSSVV IKSNGMNYSQ DIERTEEVTS SSSHDISQAL RRLEEQLSLN DDRLEEIGNC  240
YTQNENSHDS EKSTQGQTPS VPGQGYEIEH QQQSLGHEDW TEMLDGCNSS EDVLAQVRHV  300
DKFDRNVRMN NHYEHSSSAC VGVLLDEWTK ELVAEQDGYT WLDYGGTNAQ DVSLPVAKEV  360
QNLAYPAYSA AVKTYMTNPD NYTTLFDHNQ IGISLEEDLG LTIAQKQKFT IQEISPEWVY  420
ASETTKVFII GSFLCDPLDA AWTCMFGDIE VPVQIIQEGV ICCHAPPHSP GKVTICVTSG  480
NRESCSEVRE FEYRVKPTVC SHCSQPQREA SRSPEEMLLL VRFVQLLLSN PSMQKGDTSE  540
SGVDLLGKSR ADEDSWGQVI EALLAGTSTL SITTDWLLEE LVKDKLQNWL SSKSQDDNMP  600
CCSLSKKEQG VIHIISGLGF EWALHPILKS GVNVNFRDIN GWTALHWAAR FGREKMVAAL  660
IAAGASAGAV TDPNSKDPTG KTAASVAATW GHKGLAGYLS EVALTSHLFS LTLEESELSK  720
GSADVEAERT LINIPKTSPT TNEDQLSLKD SLAAARNAAQ AAARIQSAFR AHSFRRRQQI  780
EFAISAASST SRDEYGILLS DIPELSAASK FAFRNSRDYN SAALSIQKKY RGWKGRKDFL  840
AFRQKVVKIQ AHVRGYQVRK NYKVCWAVGI LEKVVLRWRR RGVGLRGFRL ETDAIDESED  900
EDILRVFRKQ KVDATIDEAV SRVLSMVESP GARQQYRRIL EKYRQAKAEL DGAEREISST  960
SYDVSSMGND DIYQFV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	0.0	CAMTA family protein