PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027151391.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

Nin-like

Protein Properties

Length: 954aa MW: 105683 Da PI: 6.2182

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027151391.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	93	2.1e-29	635	685	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+isl+dl++yFs+++kdAAk++gvc+T+LKriCRq+GI RWP+Rkik++ XP_027151391.1 635 EKSISLQDLRQYFSGSLKDAAKSIGVCPTTLKRICRQHGITRWPSRKIKKV 685 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 954 aa Download sequence
MGDGAFTAND SGTLSDNVLD FDLMDELLFD GFWLESTRES NFWEPGPSTT GALDSPLYYS 60 LTPEINIAHF NSNLDQASIS EEAKTTDFVD HKALDRTQMD EFGTRHRENL DAALHSASSG 120 QPEGFLVEGS DMNRRLWVGP TGDPTPNTSV RKRLVQAIEY LRKSTSDKDA LIQLWVPVKR 180 GGGRVLSTKN QPFSLDPNCR SLAEYRHISR NYQFAAEEDS KELVGLPGRV FLKKLPEWTP 240 DVRFFMGEEY PRVNHAQQYN VRGCLALPVF QRGSGTCLGV VEIVSTAQKV NYRPELENVC 300 KALEAVDLSS SIISTSPNMK DCDESYQLAL VDIRSVLKYV CDMNKLPLAQ TWASCSRQGK 360 GGCRHSEENY VRCVSTVDSA CYVRDPQVMD FHAACSEHHL LKAEGLPGGA FMTDQPCFAT 420 DITAFSKTDY PLSHHAKIFG MRAAVAIRVQ SIYTKSADFV LEFFLPLDCT DAEDQKQMLN 480 SIFSALQQIC HCLHVIADQK VREETTIPDD EKPSSSVSKS VKEKTLGFVS PAKELSLCTS 540 SWVAPALDNS GTAKDVAFSL DNHQEDPEEE CKLTTQWDNN KAELHHTPTS PKLIQIQQRS 600 GSKGNVVGSE DVSAVGVHNS MGDRSTGQRR RTKTEKSISL QDLRQYFSGS LKDAAKSIGV 660 CPTTLKRICR QHGITRWPSR KIKKVGHSLR KLQLVIDSVQ CADGAIRLSS FYTNFPELNS 720 ANLPTPSNLS MPQGSDHLQK LTTQPEGCIL SPETTASKSP SSSGSHSSSS SFCYSTGPMQ 780 SLPVHVPSAQ DASSAEECRA ALKKTCSDAE LHDLVKREET KLLGRSQSQK IFIDDVSPDT 840 LPSLPQTSSQ ILQSGSLFRV KVNFGEEKVR FSLQPRWGFA DLLKEVRRRF SIDDLIEIDL 900 KYLDDDNEWV LLTCDADLEE CIDIHKSSKS TVIRLSIHQG RHFNVGSTSG SHGS

Sequence ? help Back to Top

Protein Sequence Length: 954 aa Download sequence

MGDGAFTAND SGTLSDNVLD FDLMDELLFD GFWLESTRES NFWEPGPSTT GALDSPLYYS  60
LTPEINIAHF NSNLDQASIS EEAKTTDFVD HKALDRTQMD EFGTRHRENL DAALHSASSG  120
QPEGFLVEGS DMNRRLWVGP TGDPTPNTSV RKRLVQAIEY LRKSTSDKDA LIQLWVPVKR  180
GGGRVLSTKN QPFSLDPNCR SLAEYRHISR NYQFAAEEDS KELVGLPGRV FLKKLPEWTP  240
DVRFFMGEEY PRVNHAQQYN VRGCLALPVF QRGSGTCLGV VEIVSTAQKV NYRPELENVC  300
KALEAVDLSS SIISTSPNMK DCDESYQLAL VDIRSVLKYV CDMNKLPLAQ TWASCSRQGK  360
GGCRHSEENY VRCVSTVDSA CYVRDPQVMD FHAACSEHHL LKAEGLPGGA FMTDQPCFAT  420
DITAFSKTDY PLSHHAKIFG MRAAVAIRVQ SIYTKSADFV LEFFLPLDCT DAEDQKQMLN  480
SIFSALQQIC HCLHVIADQK VREETTIPDD EKPSSSVSKS VKEKTLGFVS PAKELSLCTS  540
SWVAPALDNS GTAKDVAFSL DNHQEDPEEE CKLTTQWDNN KAELHHTPTS PKLIQIQQRS  600
GSKGNVVGSE DVSAVGVHNS MGDRSTGQRR RTKTEKSISL QDLRQYFSGS LKDAAKSIGV  660
CPTTLKRICR QHGITRWPSR KIKKVGHSLR KLQLVIDSVQ CADGAIRLSS FYTNFPELNS  720
ANLPTPSNLS MPQGSDHLQK LTTQPEGCIL SPETTASKSP SSSGSHSSSS SFCYSTGPMQ  780
SLPVHVPSAQ DASSAEECRA ALKKTCSDAE LHDLVKREET KLLGRSQSQK IFIDDVSPDT  840
LPSLPQTSSQ ILQSGSLFRV KVNFGEEKVR FSLQPRWGFA DLLKEVRRRF SIDDLIEIDL  900
KYLDDDNEWV LLTCDADLEE CIDIHKSSKS TVIRLSIHQG RHFNVGSTSG SHGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35270.1	0.0	Nin-like family protein