PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027151691.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family bHLH
Protein Properties Length: 334aa    MW: 36934.8 Da    PI: 5.8844
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027151691.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH48.31.8e-154695255
                    HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                    r +h+  E+rRR++iN++f+ Lrel+P++    ++K + a+ L ++++Y+++Lq
  XP_027151691.1 46 RSKHSVTEQRRRSKINERFQILRELIPHS----DQKRDTASFLLEVIQYVQYLQ 95
                    889*************************9....8*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MKSGKGHQEE EEEEEDDFGA KKDSTPSQNN PIGVDGKSSD KANAMRSKHS VTEQRRRSKI  60
NERFQILREL IPHSDQKRDT ASFLLEVIQY VQYLQEKVQK YEGSYQAWNS EPTKLMPWRN  120
SHWRTQSFVS HPQTMKNGSG SGPLYPGRLE DNNITVSSTV QPSQQNPIES DLGREVTSKT  180
IDQQTELTNQ AMPMPMPLQA AMPVPIQNDG AFSHSQPRPA PDAQSSDCPI TDDMLNHPEG  240
LTIEGGTISI SSIYSQGLLN TLTQALQTAG VDLSQATVSV QINLGKRANS GLASGISVTK  300
DHERPSPSGD QLAGQYRDTS NGEDFSQAQK RLKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.12e-83bHLH family protein