PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027151949.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family FAR1
Protein Properties Length: 282aa    MW: 32296.9 Da    PI: 8.1207
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027151949.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR154.93e-172791189
            FAR1 11 GFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89
                     Fsvrk++ ++  ++g +t+r++ C keg +++ + + +  +rtr+ t+tgC ak+++ + + + k++v++l+leHnHel
  XP_027151949.1  2 SFSVRKDYLNND-KDGVTTSRRYSCCKEGVKRKYEGD-VMPKRTRVPTKTGCGAKMVIVLLRgTMKYRVHDLVLEHNHEL 79
                    69****998887.8999****************9999.999*****************99998****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MSFSVRKDYL NNDKDGVTTS RRYSCCKEGV KRKYEGDVMP KRTRVPTKTG CGAKMVIVLL  60
RGTMKYRVHD LVLEHNHELH IAQCAHMIPS QRKVSVAQGF QAEISEDAGI SLKQSHELMG  120
KEAGGMSNVG YTRDNLKRYL RTRWERSLKY GEADSMLNYF QEQTLENPSF FYAVQLDCEE  180
QITNIFWADA GMLINYNFFG DVVTFDTTYK TNKEYRPLGV FVGFNQHRQI VIFGAALMYD  240
ETIDSFKWVF GTFLEAMCGK RPSTILTDQD HAMAAAFSLV MP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-54FAR1 family protein