PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027152377.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 678aa MW: 79027 Da PI: 8.6945

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027152377.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	75.2	1.3e-23	13	100	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY +YAkevGF +++s+ +k ng+ ++r f+Cs egkre++k++ + r +r+etr +C ak+kv+ +++gk+++ +l eHnH l+ XP_027152377.1 13 NFYLAYAKEVGFGIKRSSFHKD-SNGKLMDRVFCCSAEGKREKDKRD-LNVRAPRPETRFNCSAKMKVNSRQTGKFRICQLIIEHNHYLS 100 6**************98887.8888*************999.999**********************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 678 aa Download sequence
MGMEFESEED AYNFYLAYAK EVGFGIKRSS FHKDSNGKLM DRVFCCSAEG KREKDKRDLN 60 VRAPRPETRF NCSAKMKVNS RQTGKFRICQ LIIEHNHYLS SPNKSHLHRS HRKINSIHAA 120 EIDMAYHVGI APKVSHELMA LQVGGRENLG FIPEDYRNYL RSKRTIQMEV GDTGGVLEYL 180 QKMQLEDPNF FYAIQVDQDD LITNIFWTDG LIRADYASFG DVVCFDTTYR KNNEGRPFAL 240 FVGVNNHKQT AIFGAALLYD ETASTFEWLF DTFARAMSGK KPNTILTDQD AAMAKGLIST 300 WPETRHRLCI WHIFQNAAIH LSHVFESFKQ FANDFSKCVY DFDEEEDFIS EWNTMLKKYG 360 LEDNDWLKRM FEIKEKWALV YGRETFCADM TTTQRSESMN SVIKRYVTYK NKFHEFFNHF 420 GRLVDDRRYK ELKTDFRAYM STPVLPFDVD VLKQAASVYT PEVFKWFEIE WGKSYDCGII 480 TYSEVGTVIE YKITPKGRKN YHMVRFDSIG DQISCSCKKF EFSGILCSHS LKVLNIRNIM 540 KIPSQYIIKR WTNKAKAGYV KDHNCCNINN DLDPKVLFTK RYRDLCRLYT QLVTKAAQTE 600 ETYKIAKEGL LKILDLVDAR LHQEGSSNEM SNATKVSNPT NNTTNASGIN IKAYRRYYKY 660 CIYEVQYATA WITRGKYK

Sequence ? help Back to Top

Protein Sequence Length: 678 aa Download sequence

MGMEFESEED AYNFYLAYAK EVGFGIKRSS FHKDSNGKLM DRVFCCSAEG KREKDKRDLN  60
VRAPRPETRF NCSAKMKVNS RQTGKFRICQ LIIEHNHYLS SPNKSHLHRS HRKINSIHAA  120
EIDMAYHVGI APKVSHELMA LQVGGRENLG FIPEDYRNYL RSKRTIQMEV GDTGGVLEYL  180
QKMQLEDPNF FYAIQVDQDD LITNIFWTDG LIRADYASFG DVVCFDTTYR KNNEGRPFAL  240
FVGVNNHKQT AIFGAALLYD ETASTFEWLF DTFARAMSGK KPNTILTDQD AAMAKGLIST  300
WPETRHRLCI WHIFQNAAIH LSHVFESFKQ FANDFSKCVY DFDEEEDFIS EWNTMLKKYG  360
LEDNDWLKRM FEIKEKWALV YGRETFCADM TTTQRSESMN SVIKRYVTYK NKFHEFFNHF  420
GRLVDDRRYK ELKTDFRAYM STPVLPFDVD VLKQAASVYT PEVFKWFEIE WGKSYDCGII  480
TYSEVGTVIE YKITPKGRKN YHMVRFDSIG DQISCSCKKF EFSGILCSHS LKVLNIRNIM  540
KIPSQYIIKR WTNKAKAGYV KDHNCCNINN DLDPKVLFTK RYRDLCRLYT QLVTKAAQTE  600
ETYKIAKEGL LKILDLVDAR LHQEGSSNEM SNATKVSNPT NNTTNASGIN IKAYRRYYKY  660
CIYEVQYATA WITRGKYK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-135	FAR1 family protein