PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027152445.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NAC
Protein Properties Length: 163aa    MW: 18438.8 Da    PI: 6.9457
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027152445.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM55.32.3e-1771473128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiyk..vePwdLpk............kvkaeekewyfFskrdkkyatgkrknratksgyW 83 
                      G+rF+P++eel+ + L+ kv++ +++  + +ke ++y   + Pw+  +              +++++ +y F++ +k +a  k++ r++ sg+W
  XP_027152445.1   7 IGCRFRPSEEELL-YLLRDKVTNPRFQY-DQVKEKKLYGegASPWNVFSdddlqrelfddnGSNGNKRMVYVFTELNKLSA--KKAARTAGSGTW 97 
                     7************.9999*******999.77999998862269***96346777888776433334556799999988765..6999*99***** PP

             NAM  84 katgkdkevlsk.kgelvglkktLvfy....kgrapkgektdWvmheyrl 128
                         k ++v +  +gel g +k+L +       + ++ +k +W+mhey++
  XP_027152445.1  98 DGEAKITTVQDMiTGELFGKRKMLSYVlhsvLHSGSEVKKGRWIMHEYAF 147
                     *9999999988889999*******999776645667777*********75 PP
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    
MVEDYAIGCR FRPSEEELLY LLRDKVTNPR FQYDQVKEKK LYGEGASPWN VFSDDDLQRE  60
LFDDNGSNGN KRMVYVFTEL NKLSAKKAAR TAGSGTWDGE AKITTVQDMI TGELFGKRKM  120
LSYVLHSVLH SGSEVKKGRW IMHEYAFAGA CLNGIGSSIH NTD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62380.12e-10NAC family protein