PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027152544.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 411aa MW: 46551.1 Da PI: 7.415

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027152544.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.2	2.7e-52	15	142	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 + pGfrFhPtdeelv +yL++k+++++l++ e ik++diyk++PwdLpk ++++ekewyf+++rd+ky+++ r+nr+t +g+Wkatg+d++++s+ XP_027152544.1 15 MLPGFRFHPTDEELVGFYLRRKIQQRPLSI-ELIKQLDIYKYDPWDLPKLATTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSS 108 579*************************.89***********8888999***********************************9 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ +glkk+Lvfy+gra kg ktdW+mhe+rl XP_027152544.1 109 eGSKCIGLKKSLVFYRGRAAKGIKTDWMMHEFRL 142 56677*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 411 aa Download sequence
MDERNDSSEK LDEVMLPGFR FHPTDEELVG FYLRRKIQQR PLSIELIKQL DIYKYDPWDL 60 PKLATTGEKE WYFYCPRDRK YRNSARPNRV TGAGFWKATG TDRPIYSSEG SKCIGLKKSL 120 VFYRGRAAKG IKTDWMMHEF RLPSLSDTGP SKRYMDKNNI PANDAWAICR IFKKANSNAQ 180 RALSHSWISP VPQTTPTTIT SDFLTQNVYG TSNFSSSNMS LTTKTSSVIQ FGDSNSDLQQ 240 SSIASTFSPL DTSPYKSIVN QMSSNIEPSQ ISVSKCVPPT STFPTIPIPT SEPLKYTIDA 300 SSLLLNMSSS MFGDFDDKVS QDQYFHNFSI TVPDQVTRRN ANHDDQEETA LVNDPNVAQR 360 DQLWGTMQSV GYPFNFPLNM GDAWKSNLFW DSSPCPSSDM STNFSTNKCY T

Sequence ? help Back to Top

Protein Sequence Length: 411 aa Download sequence

MDERNDSSEK LDEVMLPGFR FHPTDEELVG FYLRRKIQQR PLSIELIKQL DIYKYDPWDL  60
PKLATTGEKE WYFYCPRDRK YRNSARPNRV TGAGFWKATG TDRPIYSSEG SKCIGLKKSL  120
VFYRGRAAKG IKTDWMMHEF RLPSLSDTGP SKRYMDKNNI PANDAWAICR IFKKANSNAQ  180
RALSHSWISP VPQTTPTTIT SDFLTQNVYG TSNFSSSNMS LTTKTSSVIQ FGDSNSDLQQ  240
SSIASTFSPL DTSPYKSIVN QMSSNIEPSQ ISVSKCVPPT STFPTIPIPT SEPLKYTIDA  300
SSLLLNMSSS MFGDFDDKVS QDQYFHNFSI TVPDQVTRRN ANHDDQEETA LVNDPNVAQR  360
DQLWGTMQSV GYPFNFPLNM GDAWKSNLFW DSSPCPSSDM STNFSTNKCY T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26870.1	1e-109	NAC family protein