PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027152715.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family WRKY
Protein Properties Length: 178aa    MW: 19854.4 Da    PI: 10.1437
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027152715.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY85.35.6e-27115163149
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEE CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvve 49 
                     ldDgy+WrKYGqK vk+++fprsYYrCt++gC+vkk+v+r + d+ +ve
  XP_027152715.1 115 LDDGYRWRKYGQKGVKNNKFPRSYYRCTHPGCNVKKQVQRLSVDEGIVE 163
                     59***************************************99998876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MDHQHHHQGM HFLGSLVQTP ALSSISPNNE ILASSGYRLN IGDACSSREN GFPGLKAQIK  60
GPTAQVKDIF ESRTTTVAAA ANEVKSGTGS KRKGDQKKTR KPRFAFQTRS QVDILDDGYR  120
WRKYGQKGVK NNKFPRSYYR CTHPGCNVKK QVQRLSVDEG IVEEVEPEFL EVKAAYTA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13080.14e-36WRKY family protein