PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027153682.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 449aa MW: 50810.4 Da PI: 4.695

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027153682.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	100.9	1.8e-31	58	197	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra.....tks 80 lp+G++F+P+d+e++++ L kv ++ +e e+i++v+ i++++P++Lp vk++ + +fF+++ k+y+tg+rk+r+ + XP_027153682.1 58 LPRGVKFDPSDQEIIWHLLG-KVGIENmkphpfIE--EFIPTVNeddgICYTHPQNLP-GVKQDGSVAHFFHRAIKAYNTGTRKRRKilgdsSGD 148 799**********76665.55444434654322..33444433345******.677888899**************756655457 PP NAM 81 gyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 +W++tg++k+v+ + ++g+kk++v+y r k+ekt+Wvmh+y+l XP_027153682.1 149 VRWHKTGRTKPVHL-DCIQKGCKKIMVLYlsPVRGGKPEKTNWVMHQYHL 197 78********.9999******7634777777*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 449 aa Download sequence
MARPSWLVDS NRIATKIRSA SGASDLQQVN WTSNPTKTCP NCQHVIDNSD VTQEWPGLPR 60 GVKFDPSDQE IIWHLLGKVG IENMKPHPFI EEFIPTVNED DGICYTHPQN LPGVKQDGSV 120 AHFFHRAIKA YNTGTRKRRK ILGDSSGDVR WHKTGRTKPV HLDCIQKGCK KIMVLYLSPV 180 RGGKPEKTNW VMHQYHLGTE EDEREGEYVI SKVFYQQQQV KQNEKAEVEV PEDDALIVKV 240 DPVTPKSVTP EPPRTESRFP DCDAQESVLP AAQHHGVVCM EDEVRPPSDQ PNCEDPVTAV 300 DLADQQDDKT DNDAGEKREW WDSESQYLLD SQQLVEALSL CDEFLRSQSP NRDGDKNEQE 360 LKPKPRLADY AHLGPEHLKK DLEECQDLVL DPVNLELDTP PDFRLSQLEF ASQDSFISWG 420 GNKLQEFASQ DSFISWGGNK SADIEEHGT

Sequence ? help Back to Top

Protein Sequence Length: 449 aa Download sequence

MARPSWLVDS NRIATKIRSA SGASDLQQVN WTSNPTKTCP NCQHVIDNSD VTQEWPGLPR  60
GVKFDPSDQE IIWHLLGKVG IENMKPHPFI EEFIPTVNED DGICYTHPQN LPGVKQDGSV  120
AHFFHRAIKA YNTGTRKRRK ILGDSSGDVR WHKTGRTKPV HLDCIQKGCK KIMVLYLSPV  180
RGGKPEKTNW VMHQYHLGTE EDEREGEYVI SKVFYQQQQV KQNEKAEVEV PEDDALIVKV  240
DPVTPKSVTP EPPRTESRFP DCDAQESVLP AAQHHGVVCM EDEVRPPSDQ PNCEDPVTAV  300
DLADQQDDKT DNDAGEKREW WDSESQYLLD SQQLVEALSL CDEFLRSQSP NRDGDKNEQE  360
LKPKPRLADY AHLGPEHLKK DLEECQDLVL DPVNLELDTP PDFRLSQLEF ASQDSFISWG  420
GNKLQEFASQ DSFISWGGNK SADIEEHGT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	0.0	NAC family protein