PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027153916.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family C2H2
Protein Properties Length: 253aa    MW: 28936.7 Da    PI: 8.9995
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027153916.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.40.0004898119323
                     ETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   3 CpdCgksFsrksnLkrHirt.H 23 
                     C+ C+++++++ +L  H +  H
  XP_027153916.1  98 CSVCSRVYPTSRLLSIHVSEvH 119
                     *****************99877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MATEVEVSRE DQLKFPYWSP IRRRFDPESS FFAAGNVERE LLAKQVALDL TEEEKLQFRN  60
MEDEESSKLY CPLVGCGAHL RSLDEFEDHY TSRHSAACSV CSRVYPTSRL LSIHVSEVHD  120
SFFQAKVARG FAMYECLVEG CGLKLKSYKG RQQHLVDKHK FPTSFEFFKK AHPSKKQRKK  180
DQHKQAFGTK EAASRAMQME EDTMDNLVSA VSKLSTSDSP SSISFGRRHN RGLTFVPRAV  240
RQAKEPESSA RRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14140.11e-114C2H2 family protein