PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027154412.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family GATA
Protein Properties Length: 338aa    MW: 36316.9 Da    PI: 6.6397
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027154412.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA48.98.8e-16248283134
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkg 34 
                     C++Cg ++  Tp++Rrgp g++tLCnaCGl+++ kg
  XP_027154412.1 248 CRHCGISSksTPMMRRGPAGPRTLCNACGLKWANKG 283
                     *****99999**********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MNDVQRQHHP HHHQQQQQQR QPGPHHPHNH LEDEEDDDVS AGGGGGEESI DNPHPHSHDP  60
HSQIRYDALS HSHALHNGGG VTNMDSALNG VEGVGPHGLY VPGSEIAPAP AAGAGSDQLT  120
LSFQGEVYVF DSVSPEKVQA VLLLLGGYEV PTGIPAVGMA SQNPRNLSDL PGRSSQPQRA  180
ASLNRFREKR KERCFDKKIR YTVRKEVALR MQRKKGQFTS SKSVSEEVGS SSSDYNPMSG  240
QEEQETSCRH CGISSKSTPM MRRGPAGPRT LCNACGLKWA NKGILRDLSK VPAAGIHDVM  300
VKASEQSNGE ANDSDGVTAA VDIITSSNGD SSALTAEQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.21e-78GATA family protein