PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027154605.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 215aa    MW: 23629.3 Da    PI: 8.3473
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027154605.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.31.6e-1756105255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr++   ++Wv+e r+p   +k++r++lg+f t+e+Aa+a++ a+++l+g
  XP_027154605.1  56 IYRGVRRRN-GNKWVCEMREP---NKKTRIWLGTFQTPEMAARAHDVAALALRG 105
                     69****887.9******9998...347*************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MDFEGYHSST SPSSSSSSPS SSSSSSSDDN CNVTAKSSSH KRKAGRRKFK ETRHPIYRGV  60
RRRNGNKWVC EMREPNKKTR IWLGTFQTPE MAARAHDVAA LALRGDDAAL NFTDSAWRVA  120
RAQSSLASDI QIAALQAAQA FRPSLVDANP SSSSSPKNIC CHSATMFVDE EAVFNMPALI  180
DNMAEGMLLT PPAMKKGFHW DNGEGDDIEL TLWRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25480.12e-45ERF family protein