PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027155148.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NF-YB

Protein Properties

Length: 349aa MW: 40829.9 Da PI: 6.1964

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027155148.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	39.2	1.7e-12	204	297	7	95
NF-YB 7 flPianvsrimkkvl...Panakis..kdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 +lP + v r++k l a++ is ++a + e fi +t+ a+d c++ +r+ in++d++ al ++ f ++v++l+++l+++r+ ++ XP_027155148.1 204 ELPKTIVLRLVKDKLsqlSAESEISvfREALQAFSESGRIFIHHLTAAANDICKESNRQIINAEDVFKALEEIDFPEFVQSLRAFLEEFRQRNA 297 6888889999997651115667776447999999********************************************************8765 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MYHDVKELYW WDGLKKDVAE FVQKCLICQQ VKAEHQKPSG LLQPLEIPEW KWEHITMDFI 60 TGLPRSQKGF DAVWVIVDRL TKSAHFLPVS MRFSLEKLAK LYTEEIMRLH GIPISIVSDR 120 DPRFVSRFWQ KFQETLGTKL KFSTAYHPQT DGQSEKTIQT LEDMLRSCIL DFGGMVEKEK 180 EKEKAKENGE VTTVTESTAR ELEELPKTIV LRLVKDKLSQ LSAESEISVF REALQAFSES 240 GRIFIHHLTA AANDICKESN RQIINAEDVF KALEEIDFPE FVQSLRAFLE EFRQRNASQT 300 FFFWLNFGFP EIFHWAYSPF LLLTLNKACT HCYKPQIYFN VGVEQLFFF

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MYHDVKELYW WDGLKKDVAE FVQKCLICQQ VKAEHQKPSG LLQPLEIPEW KWEHITMDFI  60
TGLPRSQKGF DAVWVIVDRL TKSAHFLPVS MRFSLEKLAK LYTEEIMRLH GIPISIVSDR  120
DPRFVSRFWQ KFQETLGTKL KFSTAYHPQT DGQSEKTIQT LEDMLRSCIL DFGGMVEKEK  180
EKEKAKENGE VTTVTESTAR ELEELPKTIV LRLVKDKLSQ LSAESEISVF REALQAFSES  240
GRIFIHHLTA AANDICKESN RQIINAEDVF KALEEIDFPE FVQSLRAFLE EFRQRNASQT  300
FFFWLNFGFP EIFHWAYSPF LLLTLNKACT HCYKPQIYFN VGVEQLFFF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27470.1	2e-29	NF-YB family protein