PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027155564.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family FAR1
Protein Properties Length: 144aa    MW: 16595.4 Da    PI: 4.8627
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027155564.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR128.26.1e-092671147
            FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk 47
                    kfYn+YA ++ Fs+rk++ +k  ++g +t+r++ C+ke  + + + +
  XP_027155564.1 26 KFYNKYAFKMDFSIRKNYLNKD-KDGVTTSRRYSCYKESVKCKYEGD 71
                    6*****************9998.8999***********998877766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    
MNCSKLTEDR IPELGMEFNS EEDTYKFYNK YAFKMDFSIR KNYLNKDKDG VTTSRRYSCY  60
KESVKCKYEG DVSESEPTSI SFDEHMFIGC RSSIDSVSAE RATISTHCNK DAYNVFSPSP  120
QERNSTLGLR LTIDINSPQL QVDE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18960.12e-08FAR1 family protein